Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDFDTERVSRAVAAALVGPGGVALVVKVFAGLPGVIHTPARRGFFRSNPERIQIGDWRYEVAHDGRLL---AAHMVNGIVIAEDALIAEAVGPHLARALGQIVSRYGATVIP---NINAAIEVLGTGTDYRF
3E18 Chain:A ((161-228))
-------------------------------------------------------GDWRHLKAHGGGMVLDWGVHLLDQLLFLVDSNV-KSVSANLSFALGDEVDDGFVTFITFENGITAQIEV---------
General information:
TITO was launched using:
RESULT:
Template:
3E18.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28881 for 353 contacts (-81.8/contact) +
2D Compatibility (PS) -6215 + (NN) 2635 + (LL) 3980
1D Compatibility (HY) -5200 + (ID) 1100
Total energy: -34781.0 ( -98.53 by residue)
QMean score : -0.253
(partial model without unconserved sides chains):
PDB file :
Tito_3E18.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3E18-query.scw
PDB file :
Tito_Scwrl_3E18.pdb
: