Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSENRPEPVAAETSAATTARHSQADAGAHDAVRRGRHELPADHPRSKVGPLRRTRLTEILRGGRSRLVFGTLAILLCLVLGVAIVTQVRQTDSGDSLETARPADLLVLLDSLRQREATLNAEVIDLQNTLNALQASGNTDQAALESAQARLAALSILVGAVGATGPGVMITIDDPGPGVAPEVMIDVINELRAAGAEAIQINDAHRSVRV-------GVDTWVV----GVPGSLTVDTKVLSPPYSILAIGDPPTLAAAMNIPGGAQDGVKRVGGRMVVQQADRVDVTALRQPKQHQYAQPVK |
| 2D43 Chain:A ((129-262)) | ---------------------------------------------------------------------------------------------------------------YRNNEATGTATGDEAEGMYAVLDGTHYNDACCFDYGNAETSSTDTGAGHMEAIYLGNSTTWG-YGAGDGPWIMVDMANNLFSGADEGYNSGDPSISYRFVTAAVKGGADKWAIRGANAASGSLSTYYSGARPDYS--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D43.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15826 for 806 contacts (19.6/contact) +
2D Compatibility (PS) -11937 + (NN) 5543 + (LL) 10964
1D Compatibility (HY) 1200 + (ID) 1600
Total energy: 19996.0 ( 24.81 by residue)
QMean score : -0.034
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