Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYSGVVSRTNI-EIDDELVAAAQRMY--RLDSKRSAVDLALRRLVGEPLGRDEALALQGSGFDFSNDEIESFSDTDRKLADES
3H87 Chain:C ((2-55))
------SDVLIRDIPDDVLASLDAIAARLGLSRTEYIRRRLAQDAQTARVTVTAADLRRL-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3H87.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -699 for 207 contacts (-3.4/contact) +
2D Compatibility (PS) -5573 + (NN) -3704 + (LL) 1188
1D Compatibility (HY) -400 + (ID) 450
Total energy: -9638.0 ( -46.56 by residue)
QMean score : 0.390
(partial model without unconserved sides chains):
PDB file :
Tito_3H87.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H87-query.scw
PDB file :
Tito_Scwrl_3H87.pdb
: