Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTSPDPYAALPKLPSFSLTSTSITDGQPLATPQVSGIMGAGGADASPQLRWSGFPSETRSFAVTVYDPDAPTL-----SGFWHWAVANLPANVTELPEGVGDGRELPGGALTLVNDAGMRRYVGAAPPPGHGVHRYYVAVHAVKVEKLD----LPEDASPAYL---GFNLFQ--HAIARAVIFGTYEQR
2R77 Chain:A ((65-190))
----------------------------------------AGTGSVPRNIKFSEEPPDGYCFVLFMVDPDYPSRLRPDGKEYIHWVVSGIKT------------KELIKG--TQKNCVTILPYVGPSIKKGTGLHRISFIISLIKEEDKDNITGLPHY-GEKYITRVKFNNYESVHNIAQ----------
General information:
TITO was launched using:
RESULT:
Template:
2R77.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48162 for 705 contacts (-68.3/contact) +
2D Compatibility (PS) -12110 + (NN) -9503 + (LL) 2756
1D Compatibility (HY) -7200 + (ID) 1750
Total energy: -75969.0 ( -107.76 by residue)
QMean score : 0.268
(partial model without unconserved sides chains):
PDB file :
Tito_2R77.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R77-query.scw
PDB file :
Tito_Scwrl_2R77.pdb
: