Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSHCSHTFITDNRSPRARRGHAMSTLHKVKAYFGMAPMEDYDDEYYDD-RAPSRGYARPRFDDDYGRYDGRDYDDARSDSRG-DLRGE--PADYPPPGYRGGYADEPRFRPREFDRAEMT--RPRFGSWLRNSTRGALAMDPRRMAMMFEDGHPLSKITTLRPKDYSEARTIGERFRDGSPVIMDLVSMDNADAKRLVDFAAGLAFALRGSFDKVATKVFLLSPADVDVSPEERRRIAETGFYAYQ |
| 1E40 Chain:A ((129-230)) | ---------------------------------------EEYQIKAWTDFRFPGRGNTYSDFKWHWYHFDGADWDESRKISRIFKFRGEGKAWDWEVSSENGNY-DYLMYADVDYDHPDVVAETKKWGIWYANE----LSLDGFRI----------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E40.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 32250 for 498 contacts (64.8/contact) +
2D Compatibility (PS) -10098 + (NN) -9550 + (LL) 9376
1D Compatibility (HY) -6000 + (ID) 1450
Total energy: 14528.0 ( 29.17 by residue)
QMean score : 0.051
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