Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLMPHSAALNAARRSADLTALADGGALDVIVIGGGITGVGIALDAATRGLTVALVEKHDLAFGTSRWSSKLVHGGLRYLASGNVGIARRSAVERGILMTRNAPHLVHAMPQLVPLLPSMGHTKRA-LVRAGFLAGDALRVLAGTPAATLPRSRRIPASRVVEIAPTVRRDGLDGGLLAYDGQLIDDARLVMAVARTAAQHGARILTYVGASNVTGTS----VELTDRRTRQSFALSARAVINAAGVWAGEIDPSLRLRPS-------RGTHLVFDAKSFANPTAALTIPIPGELNRFVFAMPEQLGRIYLGLTDEDAPGPIPDVPQPSSEEITFLLDTVNTALGTAVGTKDVIGAYAGLRPLIDTGGAGVQGRTADVSRDHAVFESPSGVISVVGGKLTEYRYMAEDVLNRAITLRHLRAAKCRTRNLPLIGAPANPGPAPGSGA-------GLPESLVARYGAEAAN-----VAAAATCERPTEPVADGIDVTRAEFEYAVTHEGALDVDDILDRRTRIGLVPRDRERVVAVAKEFLSR |
| 2R4J Chain:A ((27-474)) | -------------------------------------------------LSVLMLEAQDLACATSSASSKLIHGGLRYLEHYEFRLVSEALAEREVLL-KMAPHI--AFPMRFR-LPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGST---GLRFGANSVLK--PEIKRG------FEYSDCWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPSPYGIRLIKGSHIVVPRVH----TQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYKGD-PKAVKIEESEINYLLNVYNTHFKKQLSRDDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEK-LTPYYQGIGPAWTKESVLPGG-AIEGDRDDYAARLRRRYPFLTESLARHYARTYGSNSELLLGNAGTVSDLGEDF--GHEFYEAELKYLVDHEWVRRADDALWRRTKQG------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106105 for 3315 contacts (-32.0/contact) +
2D Compatibility (PS) -44480 + (NN) -6182 + (LL) 6000
1D Compatibility (HY) -22000 + (ID) 6950
Total energy: -179717.0 ( -54.21 by residue)
QMean score : 0.286
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