Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTALEVLGGWPVPAAAAAVIGPAGVLATHGDTARVFALASVTKPLVARAAQVAVEEGVVNLDTPA--------------------------GPPGS--TVRHLLAHTSGLAM--------------------HSDQA-----------LARPGTRRMYSNYGFTVLAESVQRESGIEFGRYLTEAVCEPLGMVTT--------------------RLDGGPAA-----------AGFGATSTVADLAVFAGDLLRPSTVSAQMHADATTVQF------PGLDGVLPG-YGVQRPN-DWGLGFEIRNSKSPHWTGECNSTRTFGHFGQSGGFIWVDPKADLALVVLTARDFGDWALDLWPAISDAVLAEYT |
| 4IVK Chain:A ((95-402)) | ----------------------------------IFRIYSMSKPITTVAAMMLVEEGKLQLDEPVSKYIPSFANVKVGVETKGENGMALETGPVKRAITIQDLMRHTSGITYGFVGDGLVKKAYIASNLFDGDFDNAEFAERIAKLPLVYQPGTTWDY-GHSTDILGRVVEVVSGKSLYQFEKERLLDPLGMKDTGFYVTDPAKKSLVAEAMPNDRKIGGSEMFDPRVQKKWEPGGQGMVSTIGDYARFTQMVLNGGTLDGKRYLSPKTIAYMGSNHIPQASGIVPGAYYLPGPGVGFGLGFAVRTEAGVTPVEGSVGDLSWG--GAGGTVFWIDPKENLTVVFM------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95096 for 1634 contacts (-58.2/contact) +
2D Compatibility (PS) -22470 + (NN) -11392 + (LL) 4200
1D Compatibility (HY) -14400 + (ID) 3500
Total energy: -142658.0 ( -87.31 by residue)
QMean score : 0.437
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