Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSAAGVRSTRQRAAISTLLETLDDFRSAQELHDELRRRGENIGLTTVYRTLQSMASSGLVDTLHTDTGESVYRRCSEHHHHHLVCRSCGSTIEVGDHEVEAWAAEVATKHGFSDVSHTIEIFGTCSDCRS
4RAZ Chain:A ((15-135))
----GLKVTDQRRVIAQVLSDSADHPDVEEVYRRATAKDPRISIATVYRTVRLFEEESILERHDFGDGRARYEEAPSEHHDHLIDVNSARVIEFTSPEIEALQREIARKHGFRLVGHRLELYGVP-----
General information:
TITO was launched using:
RESULT:
Template:
4RAZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45005 for 748 contacts (-60.2/contact) +
2D Compatibility (PS) -13736 + (NN) -8375 + (LL) 492
1D Compatibility (HY) -6800 + (ID) 1750
Total energy: -75174.0 ( -100.50 by residue)
QMean score : 0.534
(partial model without unconserved sides chains):
PDB file :
Tito_4RAZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RAZ-query.scw
PDB file :
Tito_Scwrl_4RAZ.pdb
: