Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTERTLVLIKPDGIERQLIGEIISRIERKGLTIAALQLRTVSAELASQHYAEHEGKPFFGSLLEFITSGPVVAAIVEGTRAIAAVRQLAGGTDPVQAAAPGTIRGDFALETQFNLVHGSDSAESAQREIALWFPGA
1WKK Chain:A ((2-131))
--ERTFVMIKPDGVRRGLVGEILARFERKGFRIAALKLMQISQELAERHYAEHREKPFFPGLVRFITSGPVVAMVLEGPGVVAEVRKMMGATHP-KDALPGTIRGDFATTIDENVIHGSATLEDAQREIALFF---
General information:
TITO was launched using:
RESULT:
Template:
1WKK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77650 for 992 contacts (-78.3/contact) +
2D Compatibility (PS) -14171 + (NN) -5420 + (LL) 284
1D Compatibility (HY) -14400 + (ID) 3900
Total energy: -115257.0 ( -116.19 by residue)
QMean score : 0.578
(partial model without unconserved sides chains):
PDB file :
Tito_1WKK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WKK-query.scw
PDB file :
Tito_Scwrl_1WKK.pdb
: