Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPIPAPSPDARAVVTGASQNIGAALATELAARGHHLIVTARREDVLTE----LAARLADKYRVTVDVRPADLADPQERSKLADELAARPISILCANAGTATFGPIASLDLAGEKTQVQLNAVAVHDLTLAVLPGMIERKAGG-ILISGSAAGNSPIP-YNATYAATKAFVNTFSESLRGELRGSGVHVTVLAPGPVRTELPDA----------------SEASLVEKLVPDFLWISTEHTARVSLNALERNKMRVVPGLTSKAMSVASQYAPRAIVAPIVGAFYKRLGGS |
| 4YAG Chain:A ((8-249)) | -----------AFITGGASGIGFGIAQRLLANGARLVLADIRQDHLDEARQFFEERQQGRNVHTIRLDVSDRAQMAEAARECEAVMGGP-DILINNAGIDPSGPFKDATYQDWDYGLAINLMGPINGIMAFTPGMRARGRGGHIVNTASLAGLTPMPSFMAIYATAKAAVITLTETIRDSMAEDNIGVTVLMPGPIKSRIHESGQNRPERFRAGSGLAETEQQLAKRVVADN-WMEPTEVGDMIVDAIVHNKLYV----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94316 for 1859 contacts (-50.7/contact) +
2D Compatibility (PS) -23784 + (NN) -11763 + (LL) 2712
1D Compatibility (HY) -13200 + (ID) 3300
Total energy: -143651.0 ( -77.27 by residue)
QMean score : 0.521
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