Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRARSDAGGQSVKSRTSNRSRSSRRSRVRSSISALVDNPQARPRELPVLCGWPVVRVEPVCEFVPEPVCGQAEVLGEPAAAHRVTSARRSPSTTVCSRSQKASAVVISSVSSVARVRRASVSSVDATTA
4GWN Chain:A ((204-236))
------------------------------------------------------------CSFELENVCGMIQSSGDNADWQRVSQVPRGPES------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4GWN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3226 for 107 contacts (-30.1/contact) +
2D Compatibility (PS) -3544 + (NN) -2688 + (LL) 6236
1D Compatibility (HY) -800 + (ID) 600
Total energy: -4622.0 ( -43.20 by residue)
QMean score : 0.274
(partial model without unconserved sides chains):
PDB file :
Tito_4GWN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GWN-query.scw
PDB file :
Tito_Scwrl_4GWN.pdb
: