Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTTLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSRGDGGHGSSGGHASL
1SJN Chain:A ((2-132))
-STTLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDE----------------------
General information:
TITO was launched using:
RESULT:
Template:
1SJN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85431 for 877 contacts (-97.4/contact) +
2D Compatibility (PS) -14295 + (NN) -5943 + (LL) -188
1D Compatibility (HY) -18800 + (ID) 6550
Total energy: -131207.0 ( -149.61 by residue)
QMean score : 0.573
(partial model without unconserved sides chains):
PDB file :
Tito_1SJN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SJN-query.scw
PDB file :
Tito_Scwrl_1SJN.pdb
: