Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIFAKGHGTQNDFVLLPDVDAELVLTAARVAALCDRRKGLGADGVLRVTTAGAAQAVGVLDSLPEGVRVTDWYMDYRNADGSAAQMCGNGVRVFAHYLRASGLEVRDEFVVGSLAGPRPVTCHHVEAAYADVSVDMGK-----------ANRLGAG-------EAVVGGRRFHGLAVDVGNPHLACVDSQLTVDGLAALDVGA--PVSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSCGTGTVAAAVAALAAVGSPTGTLTVHVPGGEVVVTVTDATSFLRGPSVLVARGDLADDWWNAMG |
| 1GQZ Chain:A ((1-249)) | MQFSKMHGLGNDFVVVDGVTQNVFFTPETIRRLANRHCGIGFDQLLIVEAPYD----------PE----LDFHYRIFNADGSEVSQCGNGARCFARFVTLKGLTNKKDISVSTQKGNMVLTVKDDN----QIRVNMGEPIWEPAKIPFTANKFEKNYILRTDIQTVLCG------AVSMGNPH--CV---VQVDDIQTANVEQLGPLLESHERFPERVNAGFMQIINKEHIKLRVYERGAGETQACGSGA-CAAVAVGIMQGLLNNNVQVDLPGGSLMI------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GQZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133040 for 1877 contacts (-70.9/contact) +
2D Compatibility (PS) -25423 + (NN) -11576 + (LL) 4204
1D Compatibility (HY) -16800 + (ID) 4050
Total energy: -186685.0 ( -99.46 by residue)
QMean score : 0.451
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