Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRVGVLGAKGKVGATMVRAV----------AAAD--DLTLSAELDAGDPLSLLTDG------------NTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAK--PNTSVLIAPNFAIGAVLSMHFAKQAARFFDSA---EVIELHHPHKADAPSGTAARTAKLIAEA-RKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH |
| 4YWJ Chain:A ((11-272)) | -RIAVVGAAGRMGKNLIEAVQQTGGAAGLTAAVDRPDSTLVGA-DAGELAGLGRIGVPLSGDLGKVCEEFDVLIDFTHPSVTLKNIEQCRKARRAMVIGTTGFSAD-----EKLLLAEAAKDIPIVFAANFSVGVNLCLKLLDTAARVLGDEVDIEIIEAHHRHKVDAPSGTALRMGEVVAQALGRDLQEVAVYGREGQTGARARETIGFAT--VRAGDVVGDHTVLFAAEGERVEITHKASSRMTFARG---AVRAALWLEGKENGLYDMQDV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YWJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97381 for 1733 contacts (-56.2/contact) +
2D Compatibility (PS) -25770 + (NN) -13968 + (LL) 1824
1D Compatibility (HY) -13200 + (ID) 4500
Total energy: -152995.0 ( -88.28 by residue)
QMean score : 0.549
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