Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTRSREEYFNLPLKVDESSGTIGKMFVLVIYDISDNRRRASLAKILAGFGY-RVQESAFEAMLTKGQLAKLVARIDRFAIDCDNIRIYKIRGVAAVTFYGRGRLVSAEEFVFF
3EXC Chain:X ((6-61))
---------------------------LLVVYDVSDDSKRNKLANNLKKLGLERIQRSAFEGD-MD--RMKDLVRVVKLIVDTN------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3EXC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30454 for 301 contacts (-101.2/contact) +
2D Compatibility (PS) -5818 + (NN) -2432 + (LL) 4324
1D Compatibility (HY) -4400 + (ID) 1000
Total energy: -39780.0 ( -132.16 by residue)
QMean score : 0.661
(partial model without unconserved sides chains):
PDB file :
Tito_3EXC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EXC-query.scw
PDB file :
Tito_Scwrl_3EXC.pdb
: