Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVPEARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEGELLEV
4KC6 Chain:A ((2-179))
-IDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVPEARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHKGEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKE------
General information:
TITO was launched using:
RESULT:
Template:
4KC6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53945 for 1276 contacts (-42.3/contact) +
2D Compatibility (PS) -19649 + (NN) -15353 + (LL) 788
1D Compatibility (HY) -19200 + (ID) 8900
Total energy: -116259.0 ( -91.11 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_4KC6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KC6-query.scw
PDB file :
Tito_Scwrl_4KC6.pdb
: