Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRSRQPLLDALGVDLPDE-LLSLALTHRSYAYENGGLPTNERLEFLGDAVLGLTITDALFHRHPDRSEGDLAKLRASVVNTQALADVARRLCAEGLGVH--VLLGRGEANTGGADKSSILADGMESLLGAIYLQHGMEK--AREVILRLFGP-LLDAAPTLGAGLDWKTSLQELTAARGLGAPSY-LVTSTGPDHDKEFTAVVVVMDSEYGS-GVGRSKKEAEQKAAAAAWKALEVLDNAMPGKTSA
2NUF Chain:A ((5-218))
-----EQLEKKLGYTFKDKSLLEKALTHVSYSKKEH----YETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLISEEFF-----NLLAQKLELHKFIRIKRGKIN------ETIIGDVFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEITQKRWKERPEYRLISVEGPHHKKKF--IVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLLE------------
General information:
TITO was launched using:
RESULT:
Template:
2NUF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91947 for 1473 contacts (-62.4/contact) +
2D Compatibility (PS) -22458 + (NN) -11471 + (LL) 1524
1D Compatibility (HY) -17200 + (ID) 4100
Total energy: -145652.0 ( -98.88 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_2NUF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2NUF-query.scw
PDB file :
Tito_Scwrl_2NUF.pdb
: