Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAFHTHSGIGVPLRRSNVDTDQIIPAVFLKRVTRTGFEDGLFAGWRSDPAFVLNLSPFDRGSVLVAGPDFGTGSSREHAVWALMDYGFRVVISSRFGDIFRGNAGKAGLLAAEVAQDDVELLWKLIEQSPGLEITANLQDRIITAATVVLPFKIDDHSAWRLLEGLDDIALTLRKLDEIEAFEGACAYWKPRTLPAP
1V7L Chain:A ((13-100))
-----------------DISTDEITPGRY--NLTKDPKELAKIAFIEVRPDFARNVRP---GDVVVAGKNFGIGSSRESAALALKALGIAGVIAESFGRIFYRNAINIGI----------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1V7L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53868 for 680 contacts (-79.2/contact) +
2D Compatibility (PS) -9410 + (NN) -4594 + (LL) 8816
1D Compatibility (HY) -5200 + (ID) 1800
Total energy: -66056.0 ( -97.14 by residue)
QMean score : 0.287
(partial model without unconserved sides chains):
PDB file :
Tito_1V7L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1V7L-query.scw
PDB file :
Tito_Scwrl_1V7L.pdb
: