Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAEVLVLVEHAEGALKKVSAELITAARAL---GEPAAVVVGVPGTAAPLVDGLKAAGAAKIYVAESDLVDKYLITPAVD--VLAGLAESSAPAGVLIAATADGKEIAGRLAARIGSGLLVDVVDVREGG---VGVHSIFGGAFTVEAQANG-DTPVITVRAGAVEAEPAAGAGEQV--SVEVPAAAENAARITAREPAVAGDRPELTEATIVVAGGRGVGSAENFSVVEALADSLGAAVGASRAAVDSGYYPGQFQVGQTGKTV-SPQLYIALGISGAIQHRAGMQTSKTIVAVNKDEEAPIFEIADYGVVGDLFKVAPQLTEAIKARKG |
3CLU Chain:D ((2-315)) | -SKILVIAEHRRNDLRPVSLELIGAANGLKKSGEDKVVVAVIGSQADAFVPALSVNGVDELVVVKGSSID---FDPDVFEASVSALIAAHNPSVVLLPHSVDSLGYASSLASKTGYGFATDVYIVEYQGDELVATRGGYNQKVNVEVDFPGKSTVVLTIRPSVFK--PLEGAGSPVVSNVDAPSVQSRSQNKDYVEVG-GGNDIDITTVDFIMSIGRGIGEETNVEQFRELADEAGATLCCSKPIADAGWLPKSRQVGQSGKVVGSCKLYVAMGISGSIQHMAGMKHVPTIIAVNTDPGASIFTIAKYGIVADIFDIEEEL--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CLU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189404 for 2509 contacts (-75.5/contact) +
2D Compatibility (PS) -32896 + (NN) -13209 + (LL) 1684
1D Compatibility (HY) -24000 + (ID) 5400
Total energy: -263225.0 ( -104.91 by residue)
QMean score : 0.549
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