Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVTVYTKPACVQCSATSKALDKQGIAYQKVDISLDSEARDYVM-ALGYLQAPVVVAGNDHWSGFRPDRIKALAGAALTA
3ZIT Chain:A ((4-74))
--IEVYAQPDCPPCVIVKEFLKHNNVAYEEFDVKKDAAARNRLLYDYDSYSTPTVVIDGEVVAGFQIEKLQQL-------
General information:
TITO was launched using:
RESULT:
Template:
3ZIT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46696 for 492 contacts (-94.9/contact) +
2D Compatibility (PS) -7186 + (NN) -882 + (LL) 892
1D Compatibility (HY) -6000 + (ID) 900
Total energy: -60772.0 ( -123.52 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_3ZIT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZIT-query.scw
PDB file :
Tito_Scwrl_3ZIT.pdb
: