Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLQRGAGQYFAGKRCFVTGAASGIGRATALRLAAQGAELYLTDRDRDGLAQTVCDARALGAQVPEHRVLDVSDYQDVAAFAADIHARHPSMDVVLNIAGVSAWGTVDQLTHDQWSRMVAINLMGPIHVIETLVPPMVAAGRG-GHLVNVSSAAGLVGLPWHAAYSASKYGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDRDDPRVNRWVERFSGH-AVTPEKAADKILAGVTRNRYLVYTSADIRALYAFKRYAWWPYTLVMRRVNVFFTRALRPGP |
4DC1 Chain:A ((30-247)) | ---------------LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEA-DGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVR---------------EHFSDIWEVSTEEAFDRITARVPIGRYV---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DC1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124693 for 1735 contacts (-71.9/contact) +
2D Compatibility (PS) -22944 + (NN) -4762 + (LL) 5108
1D Compatibility (HY) -11600 + (ID) 3950
Total energy: -162841.0 ( -93.86 by residue)
QMean score : 0.512
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