Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEQEMTEQWLEGCAVQRIMFRDGLVLNFDDYNELVISVPLQLTLPAIETSPAEVVAIDPNDPADHERPLFDFAGATCTAFVWYDTGDLHLEFSDGHQIDVHPDDRVTAWELYGKYHGYAACLAPGKLRVVRHDVADANGDQ |
3U39 Chain:A ((33-59)) | --------------------------------------------------------------------------------------------------------------EVYGVYHGYAGLIAGNIKKLEVGDVGD----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U39.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1354 for 117 contacts (-11.6/contact) +
2D Compatibility (PS) -3076 + (NN) -784 + (LL) 7296
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -918.0 ( -7.85 by residue)
QMean score : 0.079
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