Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MANTDRPALPHKRAVPPSRADSGPRRRRTKLLDAVAGFGVTLGSMFKKTVTEEYPERPGPVAARYHGRHQLNRYPDGLEKCIGCELCAWACPADAIYVEGADNTE----EERFSPGERYGRVY-------QINYLRCIGCGLCIEACP--TRALTMTYDYELADDNRADLIYEKDRLLAPLLPEMAAPPHPRTPGATDKDYYLGNVTAEGLRGVRESQTTGDSR |
2C3Y Chain:A ((686-763)) | ------------------------------------------------------------------------------ENCIQCNQCAFVCPHSAILPVLAKEEELVGAPANFTALEAKGKELKGYKFRIQINTLDCMGCGNCADICPPKEKALVM-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C3Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38462 for 332 contacts (-115.8/contact) +
2D Compatibility (PS) -6536 + (NN) -797 + (LL) 6164
1D Compatibility (HY) -4800 + (ID) 1450
Total energy: -45881.0 ( -138.20 by residue)
QMean score : 0.287
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