Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTWPAPTAPTPVRATVTVPGSKSQTNRALVLAALAAAQGRGASTISGALRSRDTELMLDALQTLGL-----------RVDGVGSELTVSGRIEPGPGARVDCGLAGTVLRFVPPLAA---LGSVPVTFDGDQQARGRPIAPLLDALRELGVAVDGTGL----PFRVRGNGSLAGGTVAIDASASSQFVSGLLLSAASFTDGLTVQHTGSSLPSAPHIAMTAAMLRQAGVDIDDSTPNRWQVRPGP--VAARRWDIEPDLTNAVAFLSAAVVSGGTVRITGWPRVSVQPADHILAILRQLNAVVIHADSSLEVRGPTGYDGFDVDLRAVGELTPSVAALAALASPGSVSRLSGIAHLRGHETDRLAALSTEINRLGGTCRETPDGLVIT-ATPLRPGIWRAYADHRMAMAGAIIGLRVAGVEVDDIAATTKTLPEFPRLWAEMVGPGQGWGYPQPRSGQRARRATGQGSGG |
| 3NVS Chain:A ((36-448)) | ------------ISGEVNLPGSKSVSNRALLLAALAS----GTTRLTNLLDSDDIRHMLNALTKLGVNYRLSADKTTCEVEGLGQAFHTTQPLE------LFLGNAGTAMR---PLAAALCLGQGDYVLTGEPRMKERPIGHLVDALRQAGAQIEYLEQENFPPLRIQGTG-LQAGTVTIDGSISSQFLTAFLMSAPLAQGKVTIKIVGE-LVSKPYIDITLHIMEQFGVQVINHDYQEFVIPAGQSYVSPGQFLVEGDASSASYFLAAAAIKGGEVKVTGIGKNSIQGDIQFADALEKMGAQIEWGDDYVIARRGE-LNAVDLDFNHIPDAAMTIATTALFAKGTTAIR--NVYNWRVKETDRLAAMATELRKVGATVEEGEDFIVITPPTKLIHAAIDTYDDHRMAMCFSLVALSDTPVTINDPKCTSKTFPDYFDKFAQL---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NVS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -275916 for 3613 contacts (-76.4/contact) +
2D Compatibility (PS) -42230 + (NN) -18657 + (LL) -136
1D Compatibility (HY) -28800 + (ID) 6900
Total energy: -372639.0 ( -103.14 by residue)
QMean score : 0.477
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