Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGRSERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQ------WDITD-PAAAERIIRHG-DVVINCAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDF-VAVMRRLAAGHGRVDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSIDRRLPSTRD |
| 2GGS Chain:A ((2-238)) | ------RTLITGASGQLGIELSRLLSERHEVIKVYNSSEIQGGYKLDLTDFPRLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGEKGN-----YKEEDIPNPINYYGLSKLLGETFALQ--DDSLIIRTSGIF---RNKGFPIYVYKTLK--EGKTVFAFKGYYSPISARKLASAILELLELRKTG-IIHVAGER-ISRFELALKIKEKFNL-PGEVKEVDEVR------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GGS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103629 for 1844 contacts (-56.2/contact) +
2D Compatibility (PS) -25070 + (NN) -10691 + (LL) 3684
1D Compatibility (HY) -15200 + (ID) 4100
Total energy: -155006.0 ( -84.06 by residue)
QMean score : 0.471
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