Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPLPADPSPTLSAYAHPERLVTADWLSAHMGA----PGLAIVESD-------EDVLLYDVGHIPGAVKIDWHT--DLNDPRVRDYINGEQFAELMDRKGIARDDTVVIYG--DKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDVPTKTCTGYPVVQRNDAPIRAFRDDVLAILGAQ--PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADESGRFRSREELERLYDFINPD--DQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVPIVAGEEPGVVPVV |
| 1ORB Chain:A ((9-278)) | -------------------LVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSE-PSRPEPAIFKATLNRSLLKTY-EQVLENLESKRFQLVDSRAQGRYLGTQPE----PDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAKKVDLTKPLIATCRKGVTACHI-ALAAYLCGKPDVAIYDGSWFEW-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ORB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105274 for 2015 contacts (-52.2/contact) +
2D Compatibility (PS) -27409 + (NN) -18680 + (LL) 2212
1D Compatibility (HY) -14400 + (ID) 4050
Total energy: -167601.0 ( -83.18 by residue)
QMean score : 0.390
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