Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVRAVLRRTVGAQWPILAGVNFWRRGALLIGIGVGVAAVLRLVLSEERAGLLVVRSKGIDFVTTVTVAAAMVYIASTIDPLGTG
2JP3 Chain:A ((17-34))
-----------------------LQLGGLIFGGLLCIAGIA--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2JP3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4424 for 65 contacts (-68.1/contact) +
2D Compatibility (PS) -1638 + (NN) 1134 + (LL) 5968
1D Compatibility (HY) -2000 + (ID) 200
Total energy: -1160.0 ( -17.85 by residue)
QMean score : -0.057
(partial model without unconserved sides chains):
PDB file :
Tito_2JP3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JP3-query.scw
PDB file :
Tito_Scwrl_2JP3.pdb
: