Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVRAVFRRTVGAQWPILLVGSIFAVGFVLAGANFWRRGALLIGIGVGVAAVLRLVLSEERAGLLVVRSKGIDFVTTVTVAAAMVYIASTIDPLGTG
4U12 Chain:A ((15-26))
-------------------------------------------------------------------LDKWNDIIFHAS------------------
General information:
TITO was launched using:
RESULT:
Template:
4U12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -373 for 37 contacts (-10.1/contact) +
2D Compatibility (PS) -1056 + (NN) 1667 + (LL) 7892
1D Compatibility (HY) 0 + (ID) 100
Total energy: 8030.0 ( 217.03 by residue)
QMean score : -0.339
(partial model without unconserved sides chains):
PDB file :
Tito_4U12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4U12-query.scw
PDB file :
Tito_Scwrl_4U12.pdb
: