Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGHLEFLQALREDEIARRESAALTRRLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVAQALVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIRE----YTKPLVLILDDFAM---REHTAMHADDLYELISDRAITGKPLILTSNRAPNNWYGL-------FPNPVVAESLLDRLINTSHQILMDGPSYRPRKRPGRTTS |
1L8Q Chain:A ((40-169)) | -------------------------------------------------------------------------------------------------------IFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSA----DDFAQAMVEHLKKGTINEFRNMYKSVDLLLLDDVQFLSGKERTQI---EFFHIFNTLYLLEKQIILASDRHPQKLDGVSDRLVSRFEGGILVEIELD--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L8Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60985 for 785 contacts (-77.7/contact) +
2D Compatibility (PS) -12347 + (NN) -4942 + (LL) 9504
1D Compatibility (HY) -9200 + (ID) 1700
Total energy: -79670.0 ( -101.49 by residue)
QMean score : 0.450
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