Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTATEELTFESTSRFAEVDVDG--PLKLHYHEAGVGNDQTVVLLHGGGPGAASWTNFSRNIAVLARH-FHVLAVDQPGYGHSDKRAEHGQFNRYAAMALKGLFDQLGLGRVPLVGNSLGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVAPTRENLEAFLRVMVYDKNLITPELVDQRF-ALASTPESLTATRAMGKSFAGADFEAGM-MWREVYRL---RQPVLLIWGREDRVNPLDGALVALKTIPRAQLHVFGQCGHWVQVEKFDEFNKLTIEFLGGGR |
| 2PUH Chain:A ((4-283)) | ------LTESSTSKFVKINEKGFSDFNIHYNEAG--NGETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLITEELLQGRWEAIQRQPEHL-------KNFLISAQKAPLSTWDVTARLGEIKAKTFITWGRDDRFVPLDHGLKLLWNIDDARLHVFSKCGHWAQWEHADEFNRLVIDFL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PUH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153846 for 2489 contacts (-61.8/contact) +
2D Compatibility (PS) -29141 + (NN) -12581 + (LL) 796
1D Compatibility (HY) -24000 + (ID) 6350
Total energy: -225122.0 ( -90.45 by residue)
QMean score : 0.588
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