Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQLPRVGLGTDVHPIEPGRPCWLVGLLFPSADGCAGHSDGDVAVHALCDAVLSAAGLGDIGEVFGVDDPRWQGVSGADMLRHVVVLITQHGYRVGNAVVQVIGNRPKIGWRRLEAQAVLSRLLNAP---VSVSATTTDGLGLTGRGEGLAAIATALVVSLR
3F0E Chain:A ((25-178))
-----RIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVV---
General information:
TITO was launched using:
RESULT:
Template:
3F0E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -141015 for 1282 contacts (-110.0/contact) +
2D Compatibility (PS) -16677 + (NN) -12029 + (LL) 532
1D Compatibility (HY) -8000 + (ID) 3150
Total energy: -180339.0 ( -140.67 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_3F0E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F0E-query.scw
PDB file :
Tito_Scwrl_3F0E.pdb
: