Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIFKVGDTVVYPHHGAALVEAIETRTIKGEQKEYLVLKVAQGDLTVRVPAENAEYVGVRDVVGQEGLDKVFQVLRAPHTEEPTNWSRRYKANLEKLASGDVNKVAEVVRDLWRRDQERGLSAGEKRMLAKARQILVGELALAESTDDAKAETILDEVLAAAS
4XAX Chain:B ((2-155))
--FRPGDKVVLPPYGVGVVAGIAQRSVSGVSRAYYQVDFPGSRSKAYVPVEAPHSVGLRKALAPEEVPVILDLLKNGRMPLPKQWAARHRKTSEILADGNPYRIAQMAGQLRAWEVERGLPDLDRQALRRAIHLLAEEVAQSLEITVQEAKRLFEE------
General information:
TITO was launched using:
RESULT:
Template:
4XAX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60274 for 1083 contacts (-55.7/contact) +
2D Compatibility (PS) -17402 + (NN) -8347 + (LL) 1184
1D Compatibility (HY) -7600 + (ID) 2000
Total energy: -94439.0 ( -87.20 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_4XAX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XAX-query.scw
PDB file :
Tito_Scwrl_4XAX.pdb
: