Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSPAPVQVMGVLNVTDDSFSDGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ-GITVSIDTMRADVARAALQNGAQMVNDVSGGRADPAMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVAAGVDPARLVLDPGLGFAKTAQHNWAILHALPELVATGIPVLVGASRKRFLGALLAGPDGVMRPTDGRDTATAVISALAALHGAWGVRVHDVRASVDAIKVVEAWMGAERIERDG
1TX0 Chain:A ((42-293))
-------IMGILNVTPDSFSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGG--------KVSVEEEIKRVVPMIQAVSKEVKLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRD--------NMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLD------LPVEERLEGTGATVCLGIEKGCEFVRVHDVKEMSRMAKMMDAMIG--------
General information:
TITO was launched using:
RESULT:
Template:
1TX0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -151186 for 2065 contacts (-73.2/contact) +
2D Compatibility (PS) -27717 + (NN) -22030 + (LL) 1116
1D Compatibility (HY) -21600 + (ID) 5050
Total energy: -226467.0 ( -109.67 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_1TX0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TX0-query.scw
PDB file :
Tito_Scwrl_1TX0.pdb
: