Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFVTGESGMAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFSARNRAVGARLQQVT-QPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGH----VGRLHAVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVD-----AVPTEVAATWQQPEANEETVAYLQYTSGSTRIPSGVQITHLNLPTNVVQVL-NALEGQEGDRGVSWLPFFHDMGLITVLLASVLGH-SFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPPLDLS--NVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVPTVIHVDRDELNNQ-RFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIWLHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLYIAGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFDPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGKIGRRACRAAYLDGSLRSGVGSPTVFATSD |
| 3PBK Chain:A ((37-560)) | -------------------------------------------------NFYDRRCQLEDQLEYQTLKARAEAGAKRLLSLNLKKGDRVALIAETSSEFVEAFFACQYAGLVAVPLAIPMGVGQRDSWSAKLQGLLASCQPAAIITGDEWLPLVNA-----ATHDNPELHVLSHAWFKALP-EADVALQRPVPND--IAYLQYTSGSTRFPRGVIITHREVMANLRAISHDGIKLRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLRTQDFAMRPLQWLKLISK----NRGTVSVAPPFGYELCQ-RRVNEKDLAELDLSCWRVAGI--GAEPISAEQLHQFAECFRQVNFDNKTFMPCYGLAENALAVSFSDEASGVVVNEVDRDILEYQGKAVAPGAETRAVSTFVNCGK-ALPEHGIEIRNEAGMPVAERVVGHICISGPSLMSGYFGDQVSQ------------DEIAATG------WLDTGDLGYLLDGYLYVTGRIKDLIIIRGRNIWPQDIEYIAEQEPE-IHSGDAIAFV------------------------TAQEKIILQIQCRISDEERRGQLIHALAARIQSEFGVTAA-IDLLPPHSIPRTSSGKPARAEAKKRY------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PBK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200536 for 4348 contacts (-46.1/contact) +
2D Compatibility (PS) -55634 + (NN) -21115 + (LL) 7120
1D Compatibility (HY) -36400 + (ID) 8850
Total energy: -315415.0 ( -72.54 by residue)
QMean score : 0.415
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