Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYEGPKTKFHALMQEQIHNEFTAAQQYVAIAVYFDSEDLPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTVRNQFDRPREALALALDQERTVTDQVGRLTAVARDEGDFLGEQFMQWFLQEQIEEVALMATLVRVADRAGANL---FELENFVAREVDVAPAASGAPHAAGGRL
1Z4A Chain:A ((7-162))
---------KVRKALNEQLNREIYSSYLYLSMATYFDAEGFKGFAHWMKKQAQEELTHAMKFYEYIYERGGRVELEAIEKPPSNWNGIKDAFEAALKHEEFVTQSIYNILELASEEKDHATVSFLKWFVDEQVEEEDQVREILDLLEKANGQMSVIFQLDRYLGQ-------------------
General information:
TITO was launched using:
RESULT:
Template:
1Z4A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57228 for 1119 contacts (-51.1/contact) +
2D Compatibility (PS) -17242 + (NN) -14688 + (LL) 1136
1D Compatibility (HY) -12000 + (ID) 2050
Total energy: -102072.0 ( -91.22 by residue)
QMean score : 0.549
(partial model without unconserved sides chains):
PDB file :
Tito_1Z4A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z4A-query.scw
PDB file :
Tito_Scwrl_1Z4A.pdb
: