Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGLFGKRKSRATRRAEARAIKARAKLEAKLSAKNEARRIKAAQRAESKALKAQLKARRDSDRAALKVAEAELKVAREGKLLSPTRIRRLLTVSRLLAPILTPVIYRAAMAARGLIDQRRADQLGVPLAQIGRFSGHGARLSARVGGAE---RSLRMVQEKKPKDVETKQFVSAVTNRLTDLSAAVAAAEHMPAKRRRTAHSAISSQLDGIEADLMARLGLT |
5F34 Chain:A ((46-104)) | --------------------------------------------------------------------------------------------------------------------------------------------------PEQLRRNLARVVGKPPADVPD----DLIRASLASYARYWREAFRLPA----MDHGRLGEQLDVIDID-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5F34.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 589 for 233 contacts (2.5/contact) +
2D Compatibility (PS) -5913 + (NN) -3997 + (LL) 14352
1D Compatibility (HY) -4000 + (ID) 900
Total energy: 131.0 ( 0.56 by residue)
QMean score : 0.313
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