Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR
3Q0W Chain:A ((42-234))
---------------------GDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGE--
General information:
TITO was launched using:
RESULT:
Template:
3Q0W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96382 for 1395 contacts (-69.1/contact) +
2D Compatibility (PS) -21269 + (NN) -17137 + (LL) 1092
1D Compatibility (HY) -24800 + (ID) 9650
Total energy: -168146.0 ( -120.53 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_3Q0W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q0W-query.scw
PDB file :
Tito_Scwrl_3Q0W.pdb
: