Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEMKTDAATLAQEAGNFERISGDLKTQIDQVESTAGSLQGQWRGAAGTAAQAAVVRFQEAANKQKQELDEISTNIRQAGVQYSRADEEQQQALSSQMGF
4IYH Chain:A ((4-84))
---IKITPEELERIAGNFKNAAGEAQSQINRLEGDINSLEGQWAGATQAKFRGEFIQSKQAMQQYIPILEGISTDLKRIADKFR----------------
General information:
TITO was launched using:
RESULT:
Template:
4IYH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3098 for 373 contacts (-8.3/contact) +
2D Compatibility (PS) -8782 + (NN) -1485 + (LL) 1744
1D Compatibility (HY) -3600 + (ID) 1100
Total energy: -16321.0 ( -43.76 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_4IYH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IYH-query.scw
PDB file :
Tito_Scwrl_4IYH.pdb
: