Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSASSPAAWRGTLAGLIAFHIFIIIASNYLVQLPITLFGWHTTWGAFSFPFIFLATDLTVRLLGKGPARLVIARVMIPALIASYVVSVLFQEAAFRGFSALLEFNTFVARISLASFLAYVLGQILDIQVFDRLRRSRHWWTAPVASTILGNLLDTFTFFFVAFWRSDNPFMAQHWVEIATVDYGVKLSISLLLFVPLYGMLLNGILKMLPGRPQSNA |
| 2N1F Chain:A ((47-67)) | --------------------------------------------------DAIDLTDKLVSYYLESYGLELTMTVLRDMGLQELAEQLQTTKE---------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2N1F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4507 for 85 contacts (-53.0/contact) +
2D Compatibility (PS) -2233 + (NN) -1774 + (LL) 16296
1D Compatibility (HY) 0 + (ID) 150
Total energy: 7632.0 ( 89.79 by residue)
QMean score : -0.153
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