Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKQERSVPSYVEYPYEQAILYVHRNASANEMLESVQERLRALLGLLHALERIEVRTGLGVPIQRVAHILVTLGGDALTLLTAAHRATTS
3M2V Chain:A ((69-126))
MPYQVSTTDTYVE----GDDLHFVNNAAMQQMWDDI--RRTVIVGLNHAHAVIEKRLGKEVTPETITHYLETVNHAMPGAAVVQEHMVET
General information:
TITO was launched using:
RESULT:
Template:
3M2V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4915 for 237 contacts (20.7/contact) +
2D Compatibility (PS) -5873 + (NN) 1239 + (LL) 372
1D Compatibility (HY) -1600 + (ID) 950
Total energy: -1897.0 ( -8.00 by residue)
QMean score : 0.295
(partial model without unconserved sides chains):
PDB file :
Tito_3M2V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3M2V-query.scw
PDB file :
Tito_Scwrl_3M2V.pdb
: