Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDRYCVFGNPIGHSKSPLIHRLFAEQTGEALVYDAQLAPLDDFPGFARRFFEQG-KGANVTVPFKEEAYRLVDELSERATRAGAVNTLIRLADGRLRGDNTDGAGLLRDLTANAGVELRGKRVLLLGAGGAVRGVLEPFLGECPAELLIANRTARKAVDLAERFADLGAVHGCGFAEVE-GPFDLIVNGTSASLAGDVPPLAQSVIEPGRTVCYDMMYAK-EPTAFNRWAAERGAARTLDGLGMLVEQAAEAFFLWRGVRPASAPVLETLRRQLATV |
| 1P77 Chain:A ((1-271)) | MDLYAVWGNPIAQSKSPLIQNKLAAQTHQTMEYIAKLGDLDAFEQQLLAFFEEGAKGCNITSPFKERAYQLADEYSQRAKLAEACNTLKKLDDGKLYADNTDGIGLVTDLQRLNWLR-PNQHVLILGAGGATKGVLLPLL-QAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSA-------SVDAEILKLG-SAFYDMQYAKGTDTPFIALCKSLGLTNVSDGFGMLVAQAAHSFHLWRGVMPDFVSVYEQLKKAML-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P77.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163892 for 2314 contacts (-70.8/contact) +
2D Compatibility (PS) -28233 + (NN) -9637 + (LL) 396
1D Compatibility (HY) -22800 + (ID) 6000
Total energy: -230166.0 ( -99.47 by residue)
QMean score : 0.525
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