Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGYWRQRRALGGRRTAVRAPRGRLLLWCAQARRHPLSRRMESSMTLSLDLLLSLCTALAIGLLIGAERGWQERDHEDARQIAGIRTFSLAGLLGGFATLLAGELGSAVWVALLLALAALAVAGYVSDVRRGGDQGMTTEIALLMTFLLGSLALTEQRLLAAAGGIVLTLLLSLKDKLHALLKRLTAEELSGTLKLLFISVVLLPVLPNQGYGPWAFFNPYLTWWMVVLIAALGFSAYLAIRLIGSRKGLLLTAVLGGLVSSTVMTLTLARLRERMPDALLACALLATSALMFPRILVEIGAIHPALLKELALPFAATTLVYLGGTLFHALRGGRASQEAPDEPGLRNPFELLPALRFAALLSAILLLVEVGRRLFGDAGIYAVALLSGLADVDAITLSLARAAQGELDPGVASRGIALAALSNSLVKAGLVVLVGGKRLALQTLPFSLAGLLVGALLILL
2LLM Chain:A ((12-43))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VGSNKGAIIGLMVGGVVIATVIVITLVMLKKK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2LLM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6434 for 128 contacts (-50.3/contact) +
2D Compatibility (PS) -3296 + (NN) -1907 + (LL) 36584
1D Compatibility (HY) -4400 + (ID) 600
Total energy: 19947.0 ( 155.84 by residue)
QMean score : -0.018

(partial model without unconserved sides chains):
PDB file : Tito_2LLM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2LLM-query.scw
PDB file : Tito_Scwrl_2LLM.pdb: