Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSHSAKKALLPLLAVATLAGLAGCATETSTALPVQQVESVNRPYSGVRSPIAVGKFDNRSSYMRGIFSDGVDRLGGQAKTILITHLQQTNRFNVL-DRDNMSEIQQEAAIKGQAQRLKGADYVVTGDVTEFGRKEVGDRQLFGILGRGKSQIAYAKVALNIVNISTSEVVYSTQGAGEYALSNRE--VIGFGGTASYDSTLNGKVLDLAMREAVNKLVNAVDSGAWKPQNQ |
3W1E Chain:A ((96-270)) | ---------------------------------------------QYKKTILVGNIEVASPQQAVM--GQIYQVGDDFSRVVNRQLDQTSRSFVSVGTTDYSISSNYPARTQMIAQDNGAQYIIGGVITDLTATVESQ--L---L-QDDIINRQFALEMKVFDGKTGHEVFNKAYREVARWPFAKTSQVDTRS-ARFWASTYGEMMLRVSRNIMLDLESELSCKITLPEVV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3W1E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -30190 for 1321 contacts (-22.9/contact) +
2D Compatibility (PS) -18351 + (NN) -8332 + (LL) 3820
1D Compatibility (HY) -4800 + (ID) 1300
Total energy: -59153.0 ( -44.78 by residue)
QMean score : 0.285
|
|
|