Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDRKTLDDTSKFLSYVLRHQPEAIGLTLDGEGWADIDALIAGAARDGRALDRMLLGAVVENNDKKRFALSADGQRIRAVQGHSHAAVAIAYAPAVPPAVLYHGTASRFLDSIRERGLVPGSRHHVHLSARRATALEVGRRYGSPVLLEIDARDMHLAGHLFHQAENGVWLTERVPVRFIREA
2CQK Chain:A ((76-127))
---------------------------MDSDQFIPIWTVANMEEIKKLTTDPDLILEVLRSS--PMVQVDEKGEKVRPSHKRCISGPSSG--------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2CQK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15393 for 297 contacts (-51.8/contact) +
2D Compatibility (PS) -5539 + (NN) -2047 + (LL) 8460
1D Compatibility (HY) -2800 + (ID) 350
Total energy: -17669.0 ( -59.49 by residue)
QMean score : 0.445
(partial model without unconserved sides chains):
PDB file :
Tito_2CQK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CQK-query.scw
PDB file :
Tito_Scwrl_2CQK.pdb
: