Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSVGFYGKLAGRGDFVSRGLPNTFVEPWDAWLASGMRASQDELGAAWLDAYLTSPLWRFAIAPGLLGGEAVTGVVMPSIDRVGRYFPLTVACLLPANADLGGLVGGDDGWFEQVESLLLSTLEPEAEVEAFEQAVAQLPAPPCGPRIEQSLISGNLLRSEAVTPAQRLAALAQHACDGASHWWGRGSARISAGLMRYQGLPPAPAFGRFLTGEGEVIPLFPGIPG |
| 3WMI Chain:B ((2-9)) | ---------------------------QWDDWVDKMENLNHDILTTLHTARNNLEQSMITFNT------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WMI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -523 for 22 contacts (-23.8/contact) +
2D Compatibility (PS) -787 + (NN) 120 + (LL) 11236
1D Compatibility (HY) -1200 + (ID) 150
Total energy: 8696.0 ( 395.27 by residue)
QMean score : -0.469
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