Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVEIHLPGA--TTALPARLDG--VVIGVLLDVPDAAAPVVAYPGCPSEHGLAAATTTQLSRADIGAQVALMFVAGDPRQPLLIGRIQRLPQEALAQLDGERLEFSAEREIVLRCGKASITLTRAGKVIIRGAYLSSRSTGVNRIKGGSVQIN
1BS9 Chain:A ((5-58))
----IHVFGARETTASPGYGSSSTVVNGVLSAYPGSTAEAINYPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQCPSTKIVLVGYSQGGEIMDVALCGGGDPNQGYTNTAVQLSSSAVNMVKAAIFMGDPMFRAGLSYEVGTCAAGGFD
General information:
TITO was launched using:
RESULT:
Template:
1BS9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17515 for 260 contacts (-67.4/contact) +
2D Compatibility (PS) -5186 + (NN) -1608 + (LL) 476
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -27183.0 ( -104.55 by residue)
QMean score : 0.262
(partial model without unconserved sides chains):
PDB file :
Tito_1BS9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BS9-query.scw
PDB file :
Tito_Scwrl_1BS9.pdb
: