Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKKLSPIFSNITGVVRYQDLAYVASVSDEIQEQNIAHSYVTEWDCGTWCVAGEDDDMLPWEIVSATVVHEPVEQALFLGA-RGQVFCMG-SGDIHEEQLPDGDDAIGGRGNMRGVACI---DGVAYACGMD--RQVYRRFD-ENDWRAIDTGARPP--AGSEA---VVGFEAIGGFGAREIYAVGWDGEIWQYD--GKRWQPRESPTN--------------LILTAICCAE--DGSVYACGQAGTLLRGR--NDHWEIIAQDDV-----------DEDLWSLAWF---DGALYVSSATAVYTLVG--GHLKEVDFGDEQPQRCFHLSAADGVLWSIAAKDIFSFDGQQWTRID |
| 3B7F Chain:A ((16-270)) | ------------------------------------------------------------------SAPESGPVMLLVATIKGAWFLASDPARRTWEL-RGPV----FLGHTIHHIVQDPREPERMLMAARTLGPTVFRSDDGGGNWTEATRPPAFNKAP-GRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCGIYRMDRREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B7F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90252 for 1438 contacts (-62.8/contact) +
2D Compatibility (PS) -21389 + (NN) -7429 + (LL) 5064
1D Compatibility (HY) -1600 + (ID) 1100
Total energy: -116706.0 ( -81.16 by residue)
QMean score : 0.222
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