Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLAIPMPERPRRARGRLQLLAIIGLVVGPMLLASAMYKWNFWVPQGRSYSGALIGNGQTPADLGVQGR---------SQGEQWQLLVTAPGTCGEDCQQLVYLARQINIALGREASRAGHALAAS-G----EL--PADFANL-VR------QDYPRLQRYGL-----D-PALYDKA------------------------------GGGERPLLWVVDPHGNLVLRYDAKANGKKLLKDVQLLLKLSHIG |
| 2F8A Chain:A ((22-207)) | --------------------------------------------------------SMQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLGG-TTVRDYTQMNELQRRLGP--RGLVVLGFPCNQFGHQENAKNEE-ILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALLS----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F8A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46132 for 911 contacts (-50.6/contact) +
2D Compatibility (PS) -14039 + (NN) -10310 + (LL) 4916
1D Compatibility (HY) 0 + (ID) 800
Total energy: -66365.0 ( -72.85 by residue)
QMean score : 0.491
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