Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRVNKTVLVLVALVALVLGLTVHKVLTAQRQADPTVLLDAGIVILPQTRKVPALEFTNQDGQAVSTASLKGRWHLLFFGYTFCPDVCPTTLAQLRELQGKLPQEVRDDLQVVFVSVDPNRDTPQQIKQYLGYFNAGFQGLTGTPENIQKLANAMSIPYIPADTSKP--NYTVDHSGNLVIIGPDGEQHGFIRAPLNNAKLEAQLPGVLKPQA
1ON4 Chain:A ((8-147))
----------------------------------------------PLNYEVEPFTFQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAE-NIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSEIEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSASTL
General information:
TITO was launched using:
RESULT:
Template:
1ON4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46852 for 1007 contacts (-46.5/contact) +
2D Compatibility (PS) -15092 + (NN) -11892 + (LL) 5364
1D Compatibility (HY) -8800 + (ID) 2250
Total energy: -79522.0 ( -78.97 by residue)
QMean score : 0.394
(partial model without unconserved sides chains):
PDB file :
Tito_1ON4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ON4-query.scw
PDB file :
Tito_Scwrl_1ON4.pdb
: