Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRWEELSEQPCSLARVLAILGDRWTLLV---LRDCFLGVRRFDDFERSL-GVTRHVLADRLKRLVEAEILAKVPYQERPLREEYRLTEKGMELYPAILSLVNWGDRHLAGVEGPPLEHVHKHCGQHMHGVLVCSECGEPLHARDVTVREGLFWKGRLLRRG
4HQM Chain:A ((11-105))
------------LEETFKILGRSWNGLIINYLSRSNDSSAHFSDMKRDLKTITPRALSLKLSELAQWELVEKQIISTSPVQIIYVLTEKGKALAEALHPIEAWAQSY------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4HQM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54435 for 566 contacts (-96.2/contact) +
2D Compatibility (PS) -9658 + (NN) -2580 + (LL) 3952
1D Compatibility (HY) -4800 + (ID) 1350
Total energy: -68871.0 ( -121.68 by residue)
QMean score : 0.328
(partial model without unconserved sides chains):
PDB file :
Tito_4HQM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HQM-query.scw
PDB file :
Tito_Scwrl_4HQM.pdb
: